Image Analysis

The IOF Image Analysis Team provides support and expert guidance to facilitate data acquisition from imaging based research at ISTA.

We envision image analysis support as a multi-step process, guided by choices made early from labeling, staining to acquisition parameters that shape what’s possible in every step that follows.

The Image Analysis Service team provides support and advice in all steps of the process.

The earlier we are looped in the more support we can offer: Reach out at any point even if just to discuss your ideas!

Image Analysis Support

We, the Image Analysis Service team is happy to support you directly with your image analysis goals. We can help you with:

  • Image analysis software: introductions and training
  • Image analysis processing: help
  • Imaging scripting and automation
  • Image analysis projects: to develop a full project pipeline for your research

Make a request for a project or training:

Image Analysis Infrastructure

The Imaging and Optics Facility maintains and offers access to state-of-the-art image analysis software on hardware built for it – locally or remotely.

Demanding pipelines with large datasets, GPU-heavy deep learning models, 3D/4D vizualization designed to run smoothly regardless of your own hardware.

Find the right setup for your needs:

Hit a snag? Our FAQ and DATA POLICY cover many issues that may help.

Image Analysis Resources

Maybe your problem has already been solved!

Find ready-to-use and well-documented applications and pipelines in our GitLab repository .